Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01012243.1 Corchorus olitorius cultivar O-4 contig12276, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  13867

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
272--312
17
2.4
17
100
0
82
29
4
14
51
1.63
1681--1786
54
1.9
54
81
9
126
26
40
27
5
1.78
3532--3596
34
1.9
34
96
0
121
32
10
21
35
1.88
3670--3734
34
1.9
34
96
0
121
32
9
21
36
1.85
3502--3778
138
2.0
138
97
1
529
28
10
17
42
1.82
4782--4823
15
2.7
15
92
3
66
64
14
9
11
1.50

Tables:   1

The End!