Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01012254.1 Corchorus olitorius cultivar O-4 contig12287, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  62202

Tables:   1   

This is table  1  of  1  ( 5 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
25349--25376
8
3.5
8
100
0
56
39
10
39
10
1.75
30612--30650
16
2.3
18
82
13
55
56
10
28
5
1.54
52381--52407
11
2.5
11
100
0
54
0
0
7
92
0.38
52507--52566
29
2.1
28
96
3
111
18
0
21
60
1.37
53027--53064
20
1.9
20
88
0
58
50
7
7
34
1.61

Tables:   1

The End!