Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01012258.1 Corchorus olitorius cultivar O-4 contig12291, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  33540

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
9510--9561
26
2.0
26
100
0
104
19
23
26
30
1.98
12267--12340
31
2.7
26
70
21
62
54
1
0
44
1.08
12270--12342
28
2.6
28
80
6
78
53
1
0
45
1.09
16887--16942
29
2.1
27
80
12
62
76
1
12
8
1.08
17068--17119
20
2.8
18
83
16
70
53
0
0
46
1.00
17069--17135
16
3.9
17
79
16
68
52
0
0
47
1.00
17081--17134
14
3.5
15
77
22
58
51
0
0
48
1.00
17069--17137
20
3.9
18
73
22
67
53
0
0
46
1.00
23410--23459
25
2.0
25
100
0
100
40
8
4
48
1.51
24082--24791
357
2.0
353
96
1
1305
44
8
14
32
1.75
33505--33531
1
27.0
1
100
0
54
100
0
0
0
0.00

Tables:   1

The End!