Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01012259.1 Corchorus olitorius cultivar O-4 contig12292, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  21069

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1136--1249
57
2.0
57
82
1
140
47
12
10
29
1.74
5349--5384
4
9.0
4
100
0
72
25
0
25
50
1.50
5383--5416
10
3.2
10
84
15
50
50
0
8
41
1.34
9482--9558
22
3.5
22
83
1
93
41
10
7
40
1.68
9481--9581
43
2.3
44
82
1
123
41
11
8
37
1.73
9591--9632
20
2.0
20
86
9
57
35
14
2
47
1.57
14404--14457
26
2.1
26
100
0
108
44
38
7
9
1.65
15603--15635
7
4.7
7
96
0
57
60
9
18
12
1.57
18139--18237
50
2.0
50
100
0
198
48
22
8
21
1.76
18191--18298
42
2.5
43
86
5
139
48
21
8
22
1.76
18191--18302
21
5.2
21
74
8
118
48
20
8
23
1.76

Tables:   1

The End!