Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01012265.1 Corchorus olitorius cultivar O-4 contig12298, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  10903

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2875--2909
5
7.0
5
93
0
61
62
0
37
0
0.95
3135--3181
19
2.3
21
82
7
53
63
10
4
21
1.43
3406--3498
42
2.2
42
92
1
150
20
12
31
35
1.90
3630--3762
35
3.8
34
75
14
101
23
12
27
37
1.90
7074--7139
21
3.2
21
64
20
57
51
15
4
28
1.63
7082--7149
19
3.2
22
62
21
54
51
16
4
27
1.63
7061--7181
41
2.9
42
95
3
219
47
15
6
30
1.71
7248--7362
55
2.0
57
93
5
198
40
1
23
33
1.65

Tables:   1

The End!