Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01012267.1 Corchorus olitorius cultivar O-4 contig12300, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  26530

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
102--175
29
2.5
30
88
4
105
43
14
18
22
1.87
2167--2205
6
6.5
6
93
0
60
61
5
0
33
1.18
3151--3213
6
10.3
6
80
13
58
80
14
3
1
0.90
3172--3214
7
6.4
7
86
10
63
86
11
0
2
0.67
3177--3213
19
1.9
19
100
0
74
86
10
0
2
0.67
21534--21563
3
10.0
3
100
0
60
66
0
0
33
0.92
24880--25009
46
2.8
46
100
0
260
28
7
13
50
1.68
26119--26154
6
5.8
6
90
3
54
36
11
0
52
1.37
26117--26154
18
2.1
19
95
5
69
34
10
0
55
1.34

Tables:   1

The End!