Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01012269.1 Corchorus olitorius cultivar O-4 contig12302, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  28808

Tables:   1   

This is table  1  of  1  ( 5 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4367--4393
2
13.5
2
100
0
54
48
0
0
51
1.00
8354--8390
19
1.9
19
88
0
56
16
10
10
62
1.55
17063--17109
11
4.7
10
80
17
53
40
6
21
31
1.78
17074--17109
19
1.9
18
88
5
54
41
2
22
33
1.68
19423--19447
13
1.9
13
100
0
50
56
8
16
20
1.65

Tables:   1

The End!