Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01012276.1 Corchorus olitorius cultivar O-4 contig12309, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  22832

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
7357--7382
12
2.2
12
100
0
52
42
30
7
19
1.79
7634--7797
31
5.5
28
68
16
98
35
19
18
26
1.95
7636--7797
60
2.7
60
87
3
254
35
19
18
26
1.95
7667--7767
29
3.4
29
73
10
114
33
18
19
27
1.96
7838--8004
31
5.6
30
70
19
125
28
20
19
31
1.97
7836--8008
59
2.9
59
90
2
258
28
21
19
31
1.97
7872--7969
28
3.4
28
70
19
83
26
22
19
31
1.98
8326--8371
24
1.9
24
86
8
67
52
0
0
47
1.00
14282--14370
39
2.3
39
78
3
90
26
14
22
35
1.93

Tables:   1

The End!