Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01012281.1 Corchorus olitorius cultivar O-4 contig12314, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  60459

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3555--3580
11
2.4
11
100
0
52
23
53
7
15
1.67
5073--5101
2
15.0
2
92
7
51
51
0
0
48
1.00
16397--16502
56
1.9
55
88
1
158
36
10
19
33
1.86
16519--16563
22
2.0
22
100
0
90
35
4
17
42
1.70
17563--17613
13
4.1
12
75
14
50
47
9
3
39
1.55
17563--17609
24
2.0
23
92
8
78
46
10
4
38
1.58
43648--43676
15
1.9
15
100
0
58
13
0
0
86
0.58
51937--51971
17
2.1
17
89
10
54
60
2
28
8
1.41
55311--60456
334
15.4
334
86
2
6910
32
16
17
34
1.92

Tables:   1

The End!