Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01012283.1 Corchorus olitorius cultivar O-4 contig12316, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  32717

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
9--1185
333
3.6
333
85
5
1604
31
17
17
34
1.93
4032--4082
23
2.2
22
83
13
59
43
9
0
47
1.36
4852--4896
2
22.5
2
100
0
90
51
0
0
48
1.00
19541--19583
19
2.4
18
85
11
61
16
11
20
51
1.75
24573--24604
16
2.0
16
100
0
64
18
18
25
37
1.94
27750--27804
28
2.0
27
86
10
76
12
10
27
49
1.74
32419--32454
18
1.9
19
88
5
56
66
0
25
8
1.19

Tables:   1

The End!