Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01012285.1 Corchorus olitorius cultivar O-4 contig12318, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  25267

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2--34
2
16.5
2
100
0
66
48
0
0
51
1.00
338--389
27
1.9
27
100
0
104
26
21
32
19
1.97
373--536
41
4.0
41
89
0
238
39
14
26
20
1.91
623--652
12
2.4
13
94
5
53
63
10
6
20
1.47
2339--2364
13
2.0
13
100
0
52
15
15
7
61
1.55
2415--2461
23
2.0
23
100
0
94
31
25
12
29
1.93
23115--25267
324
6.7
323
90
3
3403
34
17
15
33
1.91

Tables:   1

The End!