Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01012287.1 Corchorus olitorius cultivar O-4 contig12320, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  18247

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
157--213
30
1.9
29
86
10
80
21
14
7
57
1.60
1735--1770
19
1.9
18
88
5
54
41
8
22
27
1.82
5850--5892
22
2.1
21
84
16
56
6
0
25
67
1.15
9124--9404
41
6.7
41
80
7
280
39
24
10
24
1.87
9124--9413
84
3.4
83
86
3
395
39
24
11
24
1.88
13233--13438
72
2.9
72
85
1
270
19
27
17
35
1.94
13898--13927
14
2.1
15
93
6
53
13
16
6
63
1.50
15485--15519
15
2.2
17
90
10
56
20
8
5
65
1.40
17929--17969
6
7.0
6
94
5
75
48
0
17
34
1.47

Tables:   1

The End!