Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01012289.1 Corchorus olitorius cultivar O-4 contig12322, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  30937

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3599--3780
90
2.0
90
100
0
364
38
11
13
36
1.81
12110--12215
56
1.9
56
92
0
176
14
40
33
12
1.83
12213--12285
34
2.2
34
92
2
121
8
34
43
13
1.74
14700--14748
26
1.9
25
83
4
62
57
24
6
12
1.58
17014--17054
16
2.5
17
76
15
50
4
14
36
43
1.67
20214--20248
18
1.9
18
94
0
61
0
48
5
45
1.26
21191--21226
18
2.1
18
89
5
56
52
5
0
41
1.24
24298--24399
51
2.0
50
80
12
111
21
20
14
43
1.88
28776--28829
19
2.6
21
77
19
60
38
3
18
38
1.69

Tables:   1

The End!