Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01012292.1 Corchorus olitorius cultivar O-4 contig12325, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  35995

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
7686--8227
50
10.8
50
93
0
888
28
12
27
30
1.93
8901--9050
50
3.0
50
91
0
228
36
14
17
32
1.89
9627--9666
16
2.7
15
84
7
55
15
0
17
67
1.23
32702--32773
22
3.3
22
66
24
62
30
25
8
36
1.85
32695--32796
43
2.4
43
96
0
186
28
26
8
36
1.86
32724--32794
21
3.3
21
64
24
58
28
28
8
35
1.86
35457--35491
16
2.2
16
94
0
61
28
34
0
37
1.58

Tables:   1

The End!