Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01012296.1 Corchorus olitorius cultivar O-4 contig12329, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  12849

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1114--1173
2
31.0
2
83
6
79
48
0
1
50
1.11
5671--5695
2
12.5
2
100
0
50
48
0
0
52
1.00
9887--9968
4
20.2
4
75
15
71
71
0
6
21
1.07
9894--10104
8
27.6
8
67
16
92
62
0
12
24
1.35
10041--10111
27
2.8
26
76
16
76
61
2
8
26
1.38
12349--12378
15
1.9
16
93
6
53
66
6
10
16
1.41

Tables:   1

The End!