Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01012302.1 Corchorus olitorius cultivar O-4 contig12335, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  16517

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
609--650
17
2.5
17
96
0
75
30
50
14
4
1.63
643--731
16
5.6
16
75
10
92
37
41
14
6
1.72
643--731
32
2.8
32
94
0
151
37
41
14
6
1.72
771--892
62
2.0
62
88
0
181
27
34
21
16
1.95
1091--1247
61
2.7
57
86
7
178
21
24
8
46
1.78
1128--1247
61
2.0
60
93
4
208
23
23
7
45
1.78
1398--1430
17
1.9
17
100
0
66
30
18
9
42
1.81
11130--11576
178
2.5
177
80
5
510
35
15
15
33
1.89
12542--12580
21
1.9
21
89
5
62
10
38
5
46
1.60
14372--14420
25
2.0
25
100
0
98
12
32
20
34
1.90

Tables:   1

The End!