Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01012304.1 Corchorus olitorius cultivar O-4 contig12337, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  8345

Tables:   1   

This is table  1  of  1  ( 14 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
136--181
21
2.2
21
84
7
58
54
0
17
28
1.43
194--289
27
3.9
27
68
20
82
51
0
19
29
1.48
191--298
46
2.3
46
95
1
189
52
0
18
28
1.45
146--434
19
14.6
19
72
20
154
52
1
17
28
1.53
308--434
18
7.1
18
83
7
143
52
2
17
27
1.56
278--434
17
8.7
18
80
10
153
52
1
16
28
1.54
278--434
53
2.9
55
83
11
198
52
1
16
28
1.54
732--823
27
3.4
27
74
5
87
51
0
19
29
1.47
710--823
55
2.1
55
83
6
142
50
1
19
28
1.58
2905--2940
17
2.1
17
100
0
72
33
19
30
16
1.94
5253--5285
3
11.7
3
87
12
52
63
0
0
36
0.95
5252--5285
8
4.1
8
92
7
59
61
0
0
38
0.96
6916--6945
16
1.9
16
93
6
53
40
0
36
23
1.55
8221--8345
60
2.1
60
90
3
198
33
19
18
28
1.95

Tables:   1

The End!