Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01012305.1 Corchorus olitorius cultivar O-4 contig12338, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  5625

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1--164
31
5.4
31
72
16
155
26
18
20
34
1.96
28--129
29
3.5
28
74
15
107
28
19
19
32
1.96
1--160
60
2.7
60
98
0
302
26
18
20
35
1.95
437--506
35
2.0
35
91
0
113
50
10
21
18
1.76
3154--3217
27
2.4
27
89
5
94
17
15
23
43
1.87
4126--4203
28
2.9
27
79
5
86
16
12
26
43
1.84
4157--4226
26
2.7
26
86
0
95
15
11
27
45
1.80

Tables:   1

The End!