Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01012309.1 Corchorus olitorius cultivar O-4 contig12342, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  22288

Tables:   1   

This is table  1  of  1  ( 5 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5460--5505
16
2.8
17
77
9
51
32
0
6
60
1.22
9562--9597
6
6.0
6
93
0
54
16
11
16
55
1.68
20955--21075
22
5.6
21
73
11
75
42
14
7
35
1.73
20976--21031
21
2.6
21
83
10
69
44
10
7
37
1.67
21975--22155
2
90.5
2
100
0
362
0
0
49
50
1.00

Tables:   1

The End!