Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01012314.1 Corchorus olitorius cultivar O-4 contig12347, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  25560

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
144--168
12
2.1
12
100
0
50
40
0
8
52
1.31
4852--4945
45
2.2
43
85
11
122
39
22
3
35
1.70
6832--6963
66
2.0
67
95
1
239
43
12
13
29
1.81
14897--14963
4
16.8
4
82
0
62
7
2
40
49
1.46
14891--14963
16
4.6
16
80
0
74
9
2
38
49
1.50
14933--14975
14
3.2
14
87
6
54
16
2
27
53
1.55
17941--17965
3
8.3
3
100
0
50
64
0
36
0
0.94
24746--24807
31
2.0
30
87
9
90
17
4
16
61
1.51

Tables:   1

The End!