Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01012316.1 Corchorus olitorius cultivar O-4 contig12349, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  9465

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
646--699
18
2.9
18
83
8
56
1
27
1
68
1.10
4540--4720
88
2.1
88
98
0
353
21
16
19
42
1.89
7761--7802
22
1.9
22
95
0
75
2
16
54
26
1.54
8019--8100
42
2.0
42
97
0
155
36
4
19
39
1.73
8697--9336
67
9.6
65
83
6
368
40
16
19
23
1.90
8895--9334
67
6.6
67
92
2
672
42
16
19
22
1.89

Tables:   1

The End!