Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01012319.1 Corchorus olitorius cultivar O-4 contig12352, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  24017

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
528--560
13
2.7
12
90
9
57
42
0
0
57
0.98
2644--2749
53
2.0
53
100
0
212
33
15
15
35
1.88
4478--4789
155
2.0
156
86
3
432
31
13
17
37
1.89
5994--6070
38
2.0
38
97
0
145
27
19
7
45
1.77
6714--6765
19
2.8
19
75
13
63
51
0
0
48
1.00
8097--8198
51
2.0
50
80
12
111
21
21
13
43
1.87
10053--10105
14
3.6
14
70
9
52
30
1
13
54
1.49
10896--10941
24
1.9
24
86
8
67
50
2
2
45
1.26
14683--14859
31
5.8
31
85
2
198
18
18
27
36
1.94

Tables:   1

The End!