Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01012320.1 Corchorus olitorius cultivar O-4 contig12353, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  18424

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5233--5279
26
1.9
23
87
12
67
40
4
27
27
1.75
7933--7972
15
2.6
16
88
4
55
60
12
10
17
1.59
11872--11913
21
2.0
21
85
0
57
30
14
26
28
1.95
12870--12966
32
3.0
32
85
8
110
37
24
17
20
1.94
14991--15062
26
2.6
27
75
20
69
13
15
4
66
1.39
15680--15743
24
2.6
24
71
14
58
50
18
0
31
1.48
15997--16090
45
2.2
45
86
7
133
38
20
4
37
1.72
17049--17296
135
1.9
132
83
7
322
37
14
19
28
1.91
17252--17345
31
3.0
31
79
6
91
27
15
20
36
1.93
17271--17345
31
2.4
32
84
4
100
33
17
18
30
1.94

Tables:   1

The End!