Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01012322.1 Corchorus olitorius cultivar O-4 contig12355, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  10349

Tables:   1   

This is table  1  of  1  ( 5 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1755--2048
84
3.5
85
85
3
416
22
10
27
39
1.86
6616--6651
19
1.9
18
88
5
54
41
2
22
33
1.68
8614--8655
21
2.0
21
90
9
68
30
9
28
30
1.89
9726--9872
33
4.5
33
76
5
127
27
8
21
42
1.81
9713--9839
66
1.9
66
88
0
191
27
9
21
41
1.84

Tables:   1

The End!