Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01012323.1 Corchorus olitorius cultivar O-4 contig12356, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  10801

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
623--690
32
2.2
31
84
5
84
52
4
14
27
1.61
1283--1334
20
2.6
20
78
6
61
21
25
26
26
1.99
6844--6918
35
2.1
35
95
4
134
22
17
17
42
1.89
6961--6993
16
2.1
16
94
0
57
60
0
0
39
0.97
7043--7084
15
3.1
14
87
12
61
50
0
0
50
1.00
10769--10801
2
16.5
2
100
0
66
48
0
0
51
1.00

Tables:   1

The End!