Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01012332.1 Corchorus olitorius cultivar O-4 contig12365, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  30590

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2746--2793
21
2.2
21
85
3
60
58
12
12
16
1.63
4198--4232
18
1.9
18
88
0
52
48
5
37
8
1.58
4310--4340
16
1.9
16
93
0
53
41
0
0
58
0.98
6199--6223
12
2.1
12
100
0
50
52
8
0
40
1.31
8301--8344
22
2.1
20
83
8
52
11
40
34
13
1.81
17630--17694
32
2.0
34
85
11
91
16
23
12
47
1.80
19232--19278
16
2.8
17
87
6
60
44
4
4
46
1.42
20146--20177
12
2.7
12
100
0
64
40
25
18
15
1.90
25433--25499
33
2.0
34
97
2
127
17
14
26
40
1.89
28042--28151
53
2.1
53
98
0
211
23
9
18
49
1.76
28280--28366
45
1.9
45
81
4
104
35
19
6
37
1.79
29670--29712
16
2.5
17
82
17
54
25
9
18
46
1.79

Tables:   1

The End!