Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01012334.1 Corchorus olitorius cultivar O-4 contig12367, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  41467

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5699--5733
18
1.9
18
94
0
61
37
8
11
42
1.72
9893--10138
51
4.8
51
88
3
334
31
17
13
38
1.88
9893--10159
103
2.6
99
85
5
322
31
16
13
38
1.87
29869--29894
11
2.4
11
100
0
52
7
15
7
69
1.35
30658--30693
15
2.3
16
95
4
65
13
13
11
61
1.58
32233--32285
26
2.0
26
85
0
70
39
22
18
18
1.92

Tables:   1

The End!