Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01012337.1 Corchorus olitorius cultivar O-4 contig12370, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  14105

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4639--4678
20
2.0
20
90
0
62
27
12
17
42
1.85
4727--4904
54
3.2
53
79
5
142
23
11
20
44
1.83
4803--4928
56
2.3
55
84
2
155
24
11
21
42
1.85
4781--5563
131
6.0
132
87
3
1030
25
11
19
43
1.84
4649--5060
188
2.2
187
80
5
447
25
11
19
43
1.85
4843--5533
263
2.6
261
88
4
1005
26
11
19
42
1.85
7697--7764
31
2.2
31
86
0
91
29
23
20
26
1.99
7760--7820
30
2.0
30
87
0
86
27
14
21
36
1.93
13865--13890
13
2.0
13
100
0
52
23
38
0
38
1.55

Tables:   1

The End!