Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01012338.1 Corchorus olitorius cultivar O-4 contig12371, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  22306

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1977--2034
10
6.0
10
80
11
59
50
8
1
39
1.43
1977--2026
20
2.5
20
87
6
66
50
10
2
38
1.48
3211--3257
22
2.1
22
96
0
85
14
12
36
36
1.85
4476--4938
35
13.2
35
85
0
584
33
18
10
37
1.85
11164--11210
11
4.7
10
80
17
53
40
6
21
31
1.78
11175--11210
19
1.9
18
88
5
54
41
2
22
33
1.68
22250--22287
18
2.1
18
85
9
51
65
7
18
7
1.43

Tables:   1

The End!