Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01012344.1 Corchorus olitorius cultivar O-4 contig12377, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  15399

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3839--3863
1
25.0
1
100
0
50
100
0
0
0
0.00
7473--7502
15
2.1
14
93
6
51
33
0
0
66
0.92
8562--8591
15
2.1
15
93
6
53
66
0
0
33
0.92
8874--8913
20
2.0
20
95
0
71
47
5
10
37
1.59
9528--9564
3
12.3
3
100
0
74
67
0
0
32
0.91
14330--14419
45
2.0
45
97
0
171
28
21
14
35
1.92
14987--15038
5
10.4
5
80
15
54
0
5
13
80
0.88
14995--15032
11
3.5
11
85
0
58
0
5
15
78
0.91

Tables:   1

The End!