Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01012346.1 Corchorus olitorius cultivar O-4 contig12379, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  17690

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3428--5455
676
3.0
671
91
1
3281
31
15
22
29
1.95
13391--13455
14
4.8
13
83
12
78
44
9
9
36
1.68
14088--14146
24
2.6
22
87
12
93
83
3
13
0
0.78
15081--15558
37
12.9
37
79
4
435
23
16
15
44
1.85
15081--15568
74
6.6
74
82
3
518
23
17
14
44
1.86
15664--16086
54
7.8
54
89
3
618
27
13
21
37
1.91
16190--16267
33
2.4
33
91
0
120
43
17
6
32
1.75
16389--16450
7
8.9
7
100
0
124
43
27
14
14
1.84
16449--16661
7
30.3
7
95
0
237
53
23
4
18
1.62

Tables:   1

The End!