Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01012347.1 Corchorus olitorius cultivar O-4 contig12380, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  37309

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
70--108
2
19.5
2
94
0
51
7
0
41
51
1.31
64--102
12
3.2
12
85
0
51
12
0
35
51
1.40
58--98
20
2.0
20
90
0
64
19
0
29
51
1.47
64--110
14
3.4
14
84
0
67
12
0
36
51
1.40
1021--1359
119
2.9
118
90
6
498
33
7
23
34
1.84
1573--1782
105
2.0
105
90
0
330
42
6
10
39
1.66
9465--9658
96
2.0
99
88
3
295
51
2
13
32
1.55
11160--11248
45
2.0
45
90
0
142
35
22
5
35
1.78
25848--25891
22
2.0
22
100
0
88
45
9
4
40
1.56
29917--30181
139
1.9
134
87
9
390
21
14
22
41
1.89
37120--37284
31
5.5
31
71
16
157
33
19
19
27
1.96
37124--37284
60
2.7
60
96
0
295
34
19
19
27
1.96
37155--37257
29
3.5
28
71
16
100
33
19
18
29
1.96

Tables:   1

The End!