Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01012348.1 Corchorus olitorius cultivar O-4 contig12381, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  21786

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2094--2136
22
2.0
22
95
0
77
23
18
6
51
1.70
2586--2617
16
2.0
16
100
0
64
43
12
6
37
1.68
5501--5545
12
3.5
12
90
9
63
60
8
0
31
1.28
7836--7882
24
2.0
24
100
0
94
25
40
8
25
1.84
8296--8347
26
2.0
26
81
7
61
59
19
1
19
1.47
9357--9452
16
5.8
16
75
12
70
7
14
0
78
0.96
9395--9452
12
4.8
13
81
16
63
0
20
0
79
0.74
9402--9457
22
2.5
23
88
2
78
0
19
0
80
0.71
9417--9460
11
4.2
10
80
11
52
0
20
0
79
0.73
14662--14706
12
3.4
14
82
14
60
62
8
0
28
1.25
14662--14715
26
2.2
24
86
6
72
62
7
1
27
1.32
16063--16088
2
13.0
2
100
0
52
50
0
0
50
1.00

Tables:   1

The End!