Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01012357.1 Corchorus olitorius cultivar O-4 contig12390, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  31257

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
9801--9843
21
2.0
21
90
0
68
44
9
34
11
1.73
12918--12989
35
2.0
37
86
5
103
63
8
11
16
1.49
14186--14246
30
2.0
31
83
3
79
36
16
4
42
1.70
18420--18455
18
1.9
19
88
5
56
33
11
5
50
1.61
20548--20875
164
2.0
164
100
0
656
30
15
28
25
1.96
21706--21754
21
2.3
22
80
16
59
4
32
36
26
1.75
25736--25776
21
2.0
21
85
0
55
21
26
21
29
1.99
25790--25907
52
2.2
52
93
1
200
26
22
27
24
2.00
25861--25904
22
2.0
22
86
0
61
25
25
22
27
2.00

Tables:   1

The End!