Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01012358.1 Corchorus olitorius cultivar O-4 contig12391, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  34375

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2628--2761
4
33.5
4
96
0
241
47
25
2
24
1.63
7133--7222
45
2.1
44
89
6
139
37
22
5
34
1.77
9124--9148
8
3.1
8
100
0
50
0
60
0
40
0.97
20007--20036
3
10.3
3
92
7
53
70
0
0
30
0.88
21138--21233
22
4.2
22
67
15
61
37
6
17
38
1.75
26273--26323
17
2.9
17
85
2
57
45
3
0
50
1.20
27375--27522
75
2.0
75
93
0
251
37
12
10
39
1.78

Tables:   1

The End!