Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01012361.1 Corchorus olitorius cultivar O-4 contig12394, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  44754

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
16074--16139
32
2.1
32
97
0
123
30
21
18
30
1.97
28547--29674
331
3.4
327
81
4
1288
35
17
14
32
1.90
30882--33451
331
7.8
333
83
4
3150
35
16
13
34
1.89
30883--33438
660
3.9
655
84
3
3199
35
16
13
34
1.88
37850--37980
49
2.7
49
98
0
253
34
21
6
37
1.80
44136--44165
15
2.0
15
93
0
51
0
63
6
30
1.20
44208--44361
27
5.7
26
92
3
218
0
62
11
25
1.29
44214--44268
15
3.9
15
75
22
64
0
61
12
25
1.31
44270--44343
21
3.5
21
80
7
80
0
63
12
24
1.28
44265--44361
6
17.7
6
72
18
77
0
63
11
24
1.27

Tables:   1

The End!