Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01012365.1 Corchorus olitorius cultivar O-4 contig12398, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  17356

Tables:   1   

This is table  1  of  1  ( 5 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1--3929
334
11.8
331
80
5
4047
35
17
14
32
1.90
4049--4209
60
2.7
60
84
3
191
29
16
17
36
1.92
4720--4759
15
2.7
15
100
0
80
30
25
5
40
1.77
8588--8651
30
2.2
29
86
8
94
31
4
18
45
1.70
8595--8655
30
2.0
30
100
0
122
31
6
16
45
1.73

Tables:   1

The End!