Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01012371.1 Corchorus olitorius cultivar O-4 contig12404, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  28958

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2740--2779
21
1.9
21
84
0
53
2
20
2
75
1.04
11754--11935
91
2.0
90
89
1
274
29
21
14
34
1.94
17265--17300
12
3.0
12
83
0
54
61
27
2
8
1.39
18864--18968
31
3.5
31
68
15
101
35
19
19
26
1.95
19034--19141
29
3.7
29
68
16
78
31
18
15
34
1.92
19013--19173
60
2.7
59
82
13
211
28
18
16
36
1.93
19071--19177
31
3.6
29
69
14
83
28
20
15
34
1.94
27969--28014
15
3.3
15
79
11
53
63
6
0
30
1.20
28506--28559
19
2.8
19
75
5
56
24
25
27
22
2.00

Tables:   1

The End!