Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01012375.1 Corchorus olitorius cultivar O-4 contig12408, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  11223

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
44--1068
333
3.1
332
91
2
1669
32
15
16
35
1.90
1642--2424
333
2.3
332
90
2
1205
32
16
16
33
1.92
1640--4244
915
2.9
910
89
3
3794
32
15
17
34
1.91
2563--3335
333
2.3
330
92
2
1273
32
16
17
34
1.92
2873--3936
581
1.8
579
91
1
1684
32
16
17
34
1.92
3349--7694
336
13.3
332
76
9
3616
32
14
17
35
1.90
3349--7694
654
6.6
649
79
6
4362
32
14
17
35
1.90
9216--9258
21
2.1
21
86
4
61
34
6
30
27
1.83

Tables:   1

The End!