Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01012378.1 Corchorus olitorius cultivar O-4 contig12411, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  14239

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3589--3628
20
2.0
21
85
14
57
37
12
15
35
1.85
3865--3898
14
2.4
14
90
0
50
20
17
23
38
1.93
9434--9461
13
2.2
13
100
0
56
25
21
0
53
1.46
10865--10924
22
2.7
22
82
5
68
33
10
16
40
1.82
11090--11262
22
7.9
22
75
2
123
41
9
13
35
1.77
11275--11508
110
2.2
103
87
6
335
37
9
15
36
1.81
11465--11705
22
10.9
22
70
9
125
34
12
17
36
1.86
11622--11799
22
8.1
22
67
12
80
41
11
15
31
1.84
11760--11807
22
2.2
22
88
0
69
50
8
14
27
1.71
13072--13101
13
2.3
13
94
0
51
56
16
3
23
1.55
14185--14232
2
24.5
2
85
12
64
50
2
0
47
1.12

Tables:   1

The End!