Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01012385.1 Corchorus olitorius cultivar O-4 contig12418, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  10402

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
86--122
18
2.1
18
100
0
74
40
10
21
27
1.86
818--1389
30
19.0
30
88
1
747
46
17
16
19
1.84
1745--2523
169
4.7
169
88
3
1089
34
17
19
28
1.95
2565--2744
69
2.6
70
96
1
335
28
16
29
25
1.96
4368--4411
8
5.5
8
86
10
63
13
0
6
79
0.92
4355--4426
12
6.5
11
71
25
55
13
0
6
79
0.93
4385--4429
19
2.4
18
78
10
54
11
0
6
82
0.84
4813--4848
8
4.2
8
86
13
54
13
11
2
72
1.23
4813--4848
18
2.1
16
90
10
54
13
11
2
72
1.23

Tables:   1

The End!