Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01012386.1 Corchorus olitorius cultivar O-4 contig12419, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  25360

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5402--5438
18
2.0
19
94
5
67
10
18
10
59
1.59
6428--6504
31
2.4
32
91
2
129
27
6
11
54
1.61
8054--8137
42
2.0
42
100
0
168
38
21
16
23
1.93
11402--11437
18
2.0
18
94
0
63
8
16
13
61
1.56
11986--12027
20
2.1
20
100
0
84
26
28
19
26
1.98
15465--15513
15
3.3
15
83
11
73
30
10
14
44
1.78
21036--21071
18
2.1
17
89
5
54
11
13
8
66
1.44

Tables:   1

The End!