Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01012387.1 Corchorus olitorius cultivar O-4 contig12420, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  12353

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2327--2361
18
1.9
18
94
0
61
51
11
8
28
1.67
2450--2545
35
2.8
33
71
17
81
45
0
2
52
1.12
2497--2543
19
2.5
18
86
6
58
51
0
0
48
1.00
2497--2528
16
2.0
16
93
0
55
46
0
0
53
1.00
2570--2644
35
2.1
35
95
4
134
42
17
17
22
1.89
6293--6363
15
4.7
15
92
0
115
46
12
11
29
1.77

Tables:   1

The End!