Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01012388.1 Corchorus olitorius cultivar O-4 contig12421, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  24498

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
7710--7769
29
2.0
30
83
6
77
38
16
8
36
1.79
10120--10175
29
1.9
29
85
7
78
48
16
12
23
1.80
15251--15300
22
2.3
22
86
6
66
50
2
2
46
1.24
16690--16905
86
2.5
86
98
0
414
35
14
6
43
1.71
19195--19288
31
3.0
31
84
0
125
14
20
27
37
1.92
19165--19288
62
2.0
60
85
3
167
15
21
27
35
1.94

Tables:   1

The End!