Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01012389.1 Corchorus olitorius cultivar O-4 contig12422, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  22495

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1--42
2
20.5
2
95
4
75
47
2
0
50
1.14
2795--2831
16
2.4
16
86
13
51
27
2
18
51
1.60
12433--12479
24
2.0
24
95
0
85
31
14
21
31
1.94
16764--16870
45
2.4
45
74
14
105
44
6
15
32
1.73
16791--16870
23
3.5
22
77
11
81
43
7
16
32
1.76
16770--16957
22
8.5
22
71
8
105
39
6
16
37
1.76
19896--19939
23
1.9
23
81
9
54
59
0
15
25
1.37

Tables:   1

The End!