Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01012391.1 Corchorus olitorius cultivar O-4 contig12424, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  15073

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4111--4137
13
2.1
13
100
0
54
40
7
14
37
1.74
4595--4648
15
3.5
15
82
5
63
44
3
0
51
1.19
7169--7198
15
2.0
15
100
0
60
46
20
6
26
1.75
10378--10486
21
5.4
20
83
10
118
29
17
25
27
1.97
10378--10466
38
2.2
40
86
11
121
28
17
26
26
1.98
10855--10888
11
3.1
11
100
0
68
8
44
8
38
1.67
12968--13094
33
3.8
33
75
8
105
27
7
22
41
1.81
12968--13094
66
1.9
66
87
3
184
27
7
22
41
1.81
12979--13109
33
4.0
33
76
4
86
29
6
22
42
1.77
14885--15040
21
7.4
21
83
10
167
30
16
29
24
1.96
14946--14998
18
2.8
18
85
8
61
32
20
24
22
1.98
14909--15019
39
2.7
40
83
9
118
31
17
27
23
1.97
14931--15052
60
2.0
61
90
1
192
32
16
25
25
1.96

Tables:   1

The End!