Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01012393.1 Corchorus olitorius cultivar O-4 contig12426, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  18945

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
488--522
17
2.1
17
100
0
70
57
17
5
20
1.60
1334--1462
27
4.8
27
91
0
195
22
19
39
18
1.92
5522--5563
15
2.7
15
92
3
66
11
9
14
64
1.50
10258--10296
18
2.2
18
95
0
69
23
12
25
38
1.90
15755--15819
21
2.9
23
90
9
116
41
9
18
30
1.82
18873--18903
2
15.5
2
100
0
62
48
0
0
51
1.00

Tables:   1

The End!