Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01012394.1 Corchorus olitorius cultivar O-4 contig12427, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  19584

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1162--1284
32
3.8
32
81
10
126
34
34
13
17
1.88
1196--1295
32
3.2
31
81
7
121
39
33
12
16
1.85
5188--5281
45
2.2
45
87
11
135
39
20
4
36
1.72
5803--5999
95
2.1
97
93
3
337
52
8
20
18
1.70
12184--12231
23
2.1
23
96
0
87
39
33
2
25
1.67
17281--17331
27
2.0
24
85
11
66
41
15
25
17
1.89
19547--19584
2
19.0
2
100
0
76
50
0
0
50
1.00

Tables:   1

The End!