Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01012397.1 Corchorus olitorius cultivar O-4 contig12430, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  14498

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2--68
29
2.3
29
87
2
91
19
19
22
38
1.93
1040--1072
17
1.9
17
93
0
57
39
15
21
24
1.91
6689--6742
22
2.5
22
90
0
81
38
11
22
27
1.88
6749--6923
85
2.0
86
97
2
334
29
12
10
48
1.74
10436--10474
4
9.8
4
94
0
69
0
20
0
79
0.73
10434--10485
8
6.6
8
88
2
70
0
15
0
84
0.62

Tables:   1

The End!