Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09
Sequence: AWUE01012399.1 Corchorus olitorius cultivar O-4 contig12432, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Pmatch=0.80,Pindel=0.10
tuple sizes 0,4,5,7
tuple distances 0, 29, 159, 1000
Length: 57918
ACGTcount: A:0.32, C:0.19, G:0.17, T:0.31
Found at i:1022 original size:27 final size:27
Alignment explanation
Indices: 982--1041 Score: 104
Period size: 27 Copynumber: 2.3 Consensus size: 27
972 TTCATAAAAT
*
982 TTCAT-TTAATTACAAAAGAAATTACA
1 TTCATATTAACTACAAAAGAAATTACA
1008 TTCATATTAACTACAAAAGAAATTACA
1 TTCATATTAACTACAAAAGAAATTACA
1035 TTCATAT
1 TTCATAT
1042 GAAATATAAG
Statistics
Matches: 32, Mismatches: 1, Indels: 1
0.94 0.03 0.03
Matches are distributed among these distances:
26 5 0.16
27 27 0.84
ACGTcount: A:0.48, C:0.13, G:0.03, T:0.35
Consensus pattern (27 bp):
TTCATATTAACTACAAAAGAAATTACA
Found at i:7323 original size:12 final size:12
Alignment explanation
Indices: 7301--7340 Score: 71
Period size: 12 Copynumber: 3.2 Consensus size: 12
7291 TTCAATCCTA
7301 AGGGTAAGTGTTT
1 AGGG-AAGTGTTT
7314 AGGGAAGTGTTT
1 AGGGAAGTGTTT
7326 AGGGAAGTGTTT
1 AGGGAAGTGTTT
7338 AGG
1 AGG
7341 TGAAAACTAA
Statistics
Matches: 27, Mismatches: 0, Indels: 1
0.96 0.00 0.04
Matches are distributed among these distances:
12 23 0.85
13 4 0.15
ACGTcount: A:0.25, C:0.00, G:0.42, T:0.33
Consensus pattern (12 bp):
AGGGAAGTGTTT
Found at i:9228 original size:18 final size:18
Alignment explanation
Indices: 9196--9231 Score: 56
Period size: 18 Copynumber: 2.0 Consensus size: 18
9186 ATCAAAGTGG
9196 TTAATATAAATTTTGGCC
1 TTAATATAAATTTTGGCC
9214 TTAAT-TAAATATTTGGCC
1 TTAATATAAAT-TTTGGCC
9232 AAATTAACTA
Statistics
Matches: 17, Mismatches: 0, Indels: 2
0.89 0.00 0.11
Matches are distributed among these distances:
17 5 0.29
18 12 0.71
ACGTcount: A:0.33, C:0.11, G:0.11, T:0.44
Consensus pattern (18 bp):
TTAATATAAATTTTGGCC
Found at i:9818 original size:24 final size:24
Alignment explanation
Indices: 9783--9838 Score: 94
Period size: 24 Copynumber: 2.3 Consensus size: 24
9773 AGGAAAATCT
*
9783 TTCGACCCCATGGTGGTCGTGAGA
1 TTCGACCACATGGTGGTCGTGAGA
9807 TTCGACCACATGGTGGTCGTGAGA
1 TTCGACCACATGGTGGTCGTGAGA
*
9831 TACGACCA
1 TTCGACCA
9839 AGTAGTGAAT
Statistics
Matches: 30, Mismatches: 2, Indels: 0
0.94 0.06 0.00
Matches are distributed among these distances:
24 30 1.00
ACGTcount: A:0.21, C:0.25, G:0.30, T:0.23
Consensus pattern (24 bp):
TTCGACCACATGGTGGTCGTGAGA
Found at i:10883 original size:33 final size:33
Alignment explanation
Indices: 10846--10913 Score: 127
Period size: 33 Copynumber: 2.1 Consensus size: 33
10836 TCTTGATGAA
*
10846 AGGGATTTTGTTGGAAGCCTTGGCTATATAAGC
1 AGGGATTTTGTTGGAAGCCTTGACTATATAAGC
10879 AGGGATTTTGTTGGAAGCCTTGACTATATAAGC
1 AGGGATTTTGTTGGAAGCCTTGACTATATAAGC
10912 AG
1 AG
10914 AAGCACCTCC
Statistics
Matches: 34, Mismatches: 1, Indels: 0
0.97 0.03 0.00
Matches are distributed among these distances:
33 34 1.00
ACGTcount: A:0.26, C:0.12, G:0.29, T:0.32
Consensus pattern (33 bp):
AGGGATTTTGTTGGAAGCCTTGACTATATAAGC
Found at i:11167 original size:25 final size:25
Alignment explanation
Indices: 11133--11183 Score: 102
Period size: 25 Copynumber: 2.0 Consensus size: 25
11123 ATAACAATCC
11133 ATTGTTATCCTTTTCAAACTTGTTA
1 ATTGTTATCCTTTTCAAACTTGTTA
11158 ATTGTTATCCTTTTCAAACTTGTTA
1 ATTGTTATCCTTTTCAAACTTGTTA
11183 A
1 A
11184 ACCTGATTAC
Statistics
Matches: 26, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
25 26 1.00
ACGTcount: A:0.25, C:0.16, G:0.08, T:0.51
Consensus pattern (25 bp):
ATTGTTATCCTTTTCAAACTTGTTA
Found at i:20512 original size:1 final size:1
Alignment explanation
Indices: 20468--20495 Score: 56
Period size: 1 Copynumber: 28.0 Consensus size: 1
20458 CATTCTTGTG
20468 TTTTTTTTTTTTTTTTTTTTTTTTTTTT
1 TTTTTTTTTTTTTTTTTTTTTTTTTTTT
20496 ATGGTTTAAT
Statistics
Matches: 27, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
1 27 1.00
ACGTcount: A:0.00, C:0.00, G:0.00, T:1.00
Consensus pattern (1 bp):
T
Found at i:31649 original size:27 final size:27
Alignment explanation
Indices: 31617--31695 Score: 104
Period size: 27 Copynumber: 2.9 Consensus size: 27
31607 GCATTAGGGT
* *
31617 CATCCAGGGGCATTTTAGTCATTTGCA
1 CATCCAAGGGCATTTTGGTCATTTGCA
* *
31644 CCTCCATGGGCATTTTGGTCATTTGCA
1 CATCCAAGGGCATTTTGGTCATTTGCA
*
31671 CATTCAAGGGCATTTTTGGTCATTT
1 CATCCAAGGGCA-TTTTGGTCATTT
31696 CAAGTTCACT
Statistics
Matches: 45, Mismatches: 6, Indels: 1
0.87 0.12 0.02
Matches are distributed among these distances:
27 33 0.73
28 12 0.27
ACGTcount: A:0.19, C:0.22, G:0.22, T:0.38
Consensus pattern (27 bp):
CATCCAAGGGCATTTTGGTCATTTGCA
Found at i:37232 original size:19 final size:19
Alignment explanation
Indices: 37179--37226 Score: 69
Period size: 19 Copynumber: 2.5 Consensus size: 19
37169 TTTTTTTATC
*
37179 GGACCAGGTCAAACCGGTTT
1 GGACC-GGTCAAACCGGGTT
*
37199 GGATCGGTCAAACCGGGTT
1 GGACCGGTCAAACCGGGTT
37218 GGACCGGTC
1 GGACCGGTC
37227 TGACCGAACC
Statistics
Matches: 25, Mismatches: 3, Indels: 1
0.86 0.10 0.03
Matches are distributed among these distances:
19 21 0.84
20 4 0.16
ACGTcount: A:0.21, C:0.25, G:0.35, T:0.19
Consensus pattern (19 bp):
GGACCGGTCAAACCGGGTT
Found at i:43387 original size:13 final size:13
Alignment explanation
Indices: 43369--43393 Score: 50
Period size: 13 Copynumber: 1.9 Consensus size: 13
43359 ATAAAAAATA
43369 AAAAAATGAAAAG
1 AAAAAATGAAAAG
43382 AAAAAATGAAAA
1 AAAAAATGAAAA
43394 AAATTAAACG
Statistics
Matches: 12, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
13 12 1.00
ACGTcount: A:0.80, C:0.00, G:0.12, T:0.08
Consensus pattern (13 bp):
AAAAAATGAAAAG
Found at i:43801 original size:19 final size:20
Alignment explanation
Indices: 43779--43855 Score: 111
Period size: 20 Copynumber: 3.9 Consensus size: 20
43769 CAAGGAATTC
43779 AAAAAAAAAAAATCAAATCA
1 AAAAAAAAAAAATCAAATCA
**
43799 AAAAATCAAAAAT-AAATCA
1 AAAAAAAAAAAATCAAATCA
*
43818 AAAAAAAAAAAATCAAAGCA
1 AAAAAAAAAAAATCAAATCA
43838 AAAAAAACAAAAATCAAA
1 AAAAAAA-AAAAATCAAA
43856 AAGAGAATTG
Statistics
Matches: 50, Mismatches: 5, Indels: 3
0.86 0.09 0.05
Matches are distributed among these distances:
19 17 0.34
20 23 0.46
21 10 0.20
ACGTcount: A:0.79, C:0.10, G:0.01, T:0.09
Consensus pattern (20 bp):
AAAAAAAAAAAATCAAATCA
Found at i:43803 original size:15 final size:15
Alignment explanation
Indices: 43800--43849 Score: 57
Period size: 15 Copynumber: 3.3 Consensus size: 15
43790 ATCAAATCAA
43800 AAAATCAAAAATAAATC
1 AAAA-CAAAAA-AAATC
*
43817 AAAAAAAAAAAAATC
1 AAAACAAAAAAAATC
*
43832 AAAGCAAAAAAAA-C
1 AAAACAAAAAAAATC
43846 AAAA
1 AAAA
43850 ATCAAAAAGA
Statistics
Matches: 29, Mismatches: 4, Indels: 3
0.81 0.11 0.08
Matches are distributed among these distances:
14 4 0.14
15 16 0.55
16 5 0.17
17 4 0.14
ACGTcount: A:0.80, C:0.10, G:0.02, T:0.08
Consensus pattern (15 bp):
AAAACAAAAAAAATC
Found at i:43822 original size:13 final size:12
Alignment explanation
Indices: 43781--43826 Score: 58
Period size: 12 Copynumber: 3.8 Consensus size: 12
43771 AGGAATTCAA
43781 AAAAAAAAAATC
1 AAAAAAAAAATC
*
43793 AAATCAAAAAATC
1 AAA-AAAAAAATC
*
43806 -AAAAATAAATC
1 AAAAAAAAAATC
43817 AAAAAAAAAA
1 AAAAAAAAAA
43827 AAATCAAAGC
Statistics
Matches: 28, Mismatches: 4, Indels: 4
0.78 0.11 0.11
Matches are distributed among these distances:
11 7 0.25
12 13 0.46
13 8 0.29
ACGTcount: A:0.80, C:0.09, G:0.00, T:0.11
Consensus pattern (12 bp):
AAAAAAAAAATC
Found at i:43825 original size:24 final size:24
Alignment explanation
Indices: 43782--43827 Score: 65
Period size: 24 Copynumber: 1.9 Consensus size: 24
43772 GGAATTCAAA
**
43782 AAAAAAAAATCAAATCAAAAAATC
1 AAAAAAAAATCAAAAAAAAAAATC
*
43806 AAAAATAAATCAAAAAAAAAAA
1 AAAAAAAAATCAAAAAAAAAAA
43828 AATCAAAGCA
Statistics
Matches: 19, Mismatches: 3, Indels: 0
0.86 0.14 0.00
Matches are distributed among these distances:
24 19 1.00
ACGTcount: A:0.80, C:0.09, G:0.00, T:0.11
Consensus pattern (24 bp):
AAAAAAAAATCAAAAAAAAAAATC
Found at i:43832 original size:39 final size:36
Alignment explanation
Indices: 43779--43857 Score: 113
Period size: 39 Copynumber: 2.1 Consensus size: 36
43769 CAAGGAATTC
*
43779 AAAAAAAAAAAATCAAATCAAAAAATCAAAAATAAATCA
1 AAAAAAAAAAAATCAAAGCAAAAAA--AAAAA-AAATCA
*
43818 AAAAAAAAAAAATCAAAGCAAAAAAAACAAAAATCA
1 AAAAAAAAAAAATCAAAGCAAAAAAAAAAAAAATCA
43854 AAAA
1 AAAA
43858 GAGAATTGAT
Statistics
Matches: 38, Mismatches: 2, Indels: 3
0.88 0.05 0.07
Matches are distributed among these distances:
36 10 0.26
37 4 0.11
39 24 0.63
ACGTcount: A:0.80, C:0.10, G:0.01, T:0.09
Consensus pattern (36 bp):
AAAAAAAAAAAATCAAAGCAAAAAAAAAAAAAATCA
Found at i:43842 original size:13 final size:12
Alignment explanation
Indices: 43785--43825 Score: 50
Period size: 11 Copynumber: 3.5 Consensus size: 12
43775 ATTCAAAAAA
43785 AAAAAATCAAATC
1 AAAAAATCAAA-C
43798 AAAAAATCAAA-
1 AAAAAATCAAAC
*
43809 AATAAATCAAA-
1 AAAAAATCAAAC
43820 AAAAAA
1 AAAAAA
43826 AAAATCAAAG
Statistics
Matches: 26, Mismatches: 2, Indels: 2
0.87 0.07 0.07
Matches are distributed among these distances:
11 15 0.58
13 11 0.42
ACGTcount: A:0.78, C:0.10, G:0.00, T:0.12
Consensus pattern (12 bp):
AAAAAATCAAAC
Found at i:44182 original size:14 final size:15
Alignment explanation
Indices: 44158--44190 Score: 50
Period size: 14 Copynumber: 2.3 Consensus size: 15
44148 AGTGCCTGTA
*
44158 AAAAAATGAATGATG
1 AAAAAATGAATGAAG
44173 AAAAAA-GAATGAAG
1 AAAAAATGAATGAAG
44187 AAAA
1 AAAA
44191 GAAGCTCTAG
Statistics
Matches: 17, Mismatches: 1, Indels: 1
0.89 0.05 0.05
Matches are distributed among these distances:
14 11 0.65
15 6 0.35
ACGTcount: A:0.70, C:0.00, G:0.18, T:0.12
Consensus pattern (15 bp):
AAAAAATGAATGAAG
Found at i:44677 original size:50 final size:50
Alignment explanation
Indices: 44614--44763 Score: 221
Period size: 50 Copynumber: 3.0 Consensus size: 50
44604 AAAGCAAGAA
* *
44614 TTTTATAATAAGATTGCATTCCATTCGTGAGTCCAAGGTCAAAATTCGCT
1 TTTTATAATAAGATTGCATTCCATTTGTGAGTCCAAGATCAAAATTCGCT
* *
44664 TTTTATAATAAGATTGCATTCCATTTGTGAGTCCAAGACCAAAATTTGCT
1 TTTTATAATAAGATTGCATTCCATTTGTGAGTCCAAGATCAAAATTCGCT
* * *
44714 TTTCA-AAGTAAGGTTGCATTCCGTTTGTGAGTCCAAGATCAAAATTCGCT
1 TTTTATAA-TAAGATTGCATTCCATTTGTGAGTCCAAGATCAAAATTCGCT
44764 CTTCGAGGGG
Statistics
Matches: 90, Mismatches: 9, Indels: 2
0.89 0.09 0.02
Matches are distributed among these distances:
49 2 0.02
50 88 0.98
ACGTcount: A:0.30, C:0.17, G:0.17, T:0.36
Consensus pattern (50 bp):
TTTTATAATAAGATTGCATTCCATTTGTGAGTCCAAGATCAAAATTCGCT
Found at i:45995 original size:69 final size:69
Alignment explanation
Indices: 45922--46076 Score: 265
Period size: 69 Copynumber: 2.2 Consensus size: 69
45912 AGCAACATAA
* *
45922 GCTTTTCCACAAGCCAAACTCGTTTCCATACGAGTCAGCTCAAGCCTTGGTTCCATCCAAGCAGC
1 GCTTTTCCACAAGCCAAACTCGTTTCCATACGAGTCAGCTCAAGCCTTGGTTCCACCCAAGCAAC
45987 AGGG
66 AGGG
* *
45991 GCTTTTCCACAAGCCAAACTCGTTTCCATACGAGTCAGTTCAAGCTTTGGTTCCACCCAAGCAAC
1 GCTTTTCCACAAGCCAAACTCGTTTCCATACGAGTCAGCTCAAGCCTTGGTTCCACCCAAGCAAC
46056 AGGG
66 AGGG
*
46060 GCTTTTCCATAAGCCAA
1 GCTTTTCCACAAGCCAA
46077 GTTCATTTAC
Statistics
Matches: 81, Mismatches: 5, Indels: 0
0.94 0.06 0.00
Matches are distributed among these distances:
69 81 1.00
ACGTcount: A:0.26, C:0.31, G:0.19, T:0.25
Consensus pattern (69 bp):
GCTTTTCCACAAGCCAAACTCGTTTCCATACGAGTCAGCTCAAGCCTTGGTTCCACCCAAGCAAC
AGGG
Found at i:46237 original size:67 final size:68
Alignment explanation
Indices: 46118--46263 Score: 179
Period size: 67 Copynumber: 2.1 Consensus size: 68
46108 ACTAAACTCG
* * * *
46118 TTTCCATACGAGTCAGTTCAAGCCTTGGTTCCATCCAAGCAGCATGTGCTTTTCCATAAGCCAAA
1 TTTCCATACGAGTCAGTTCAA-CCTTGGTTCCATCCAAACAGCAAGGGCTTTTCCACAAGCCAAA
46183 CTAT
65 CTAT
* *
46187 TTTCCTTACGAGTCAG-TCTAA-CTTGGTTCCATCCAAACAGTAAGGGCTTTTCCACAAGCCAAA
1 TTTCCATACGAGTCAGTTC-AACCTTGGTTCCATCCAAACAGCAAGGGCTTTTCCACAAGCCAAA
* **
46250 TTCG
65 CTAT
46254 TTTCCATACG
1 TTTCCATACG
46264 GTGCATTACC
Statistics
Matches: 66, Mismatches: 10, Indels: 4
0.82 0.12 0.05
Matches are distributed among these distances:
67 47 0.71
68 2 0.03
69 17 0.26
ACGTcount: A:0.26, C:0.27, G:0.16, T:0.31
Consensus pattern (68 bp):
TTTCCATACGAGTCAGTTCAACCTTGGTTCCATCCAAACAGCAAGGGCTTTTCCACAAGCCAAAC
TAT
Found at i:49587 original size:36 final size:36
Alignment explanation
Indices: 49547--49634 Score: 158
Period size: 36 Copynumber: 2.4 Consensus size: 36
49537 TAGTATCCAC
49547 ATTAGTAATTAGGCATCATCATTCACATTAGTAATT
1 ATTAGTAATTAGGCATCATCATTCACATTAGTAATT
**
49583 ATTAGTAATTAGGCATCATTGTTCACATTAGTAATT
1 ATTAGTAATTAGGCATCATCATTCACATTAGTAATT
49619 ATTAGTAATTAGGCAT
1 ATTAGTAATTAGGCAT
49635 TGCATTCACA
Statistics
Matches: 50, Mismatches: 2, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
36 50 1.00
ACGTcount: A:0.35, C:0.11, G:0.14, T:0.40
Consensus pattern (36 bp):
ATTAGTAATTAGGCATCATCATTCACATTAGTAATT
Found at i:54794 original size:44 final size:43
Alignment explanation
Indices: 54718--54803 Score: 102
Period size: 44 Copynumber: 2.0 Consensus size: 43
54708 ATCTCCGTTG
* * *
54718 ATATGTGTTATACATCCTTCATGCATGGTCCATGT-CTTTGTAT
1 ATATATGTTATACATCCATCATGCATGATCCAT-TCCTTTGTAT
* *
54761 ATATATGTTCATACATTCATCATGCATTATCCATTCCTTTGTA
1 ATATATGTT-ATACATCCATCATGCATGATCCATTCCTTTGTA
54804 CATAGGTTCA
Statistics
Matches: 36, Mismatches: 5, Indels: 3
0.82 0.11 0.07
Matches are distributed among these distances:
43 9 0.25
44 27 0.75
ACGTcount: A:0.24, C:0.20, G:0.12, T:0.44
Consensus pattern (43 bp):
ATATATGTTATACATCCATCATGCATGATCCATTCCTTTGTAT
Found at i:56010 original size:13 final size:13
Alignment explanation
Indices: 55981--56018 Score: 67
Period size: 14 Copynumber: 2.8 Consensus size: 13
55971 TATTTTCAAG
55981 AAAAAGGTTTTCA
1 AAAAAGGTTTTCA
55994 AAAATAGGTTTTCA
1 AAAA-AGGTTTTCA
56008 AAAAAGGTTTT
1 AAAAAGGTTTT
56019 GAGTCTTTTA
Statistics
Matches: 24, Mismatches: 0, Indels: 2
0.92 0.00 0.08
Matches are distributed among these distances:
13 11 0.46
14 13 0.54
ACGTcount: A:0.45, C:0.05, G:0.16, T:0.34
Consensus pattern (13 bp):
AAAAAGGTTTTCA
Found at i:56307 original size:12 final size:12
Alignment explanation
Indices: 56290--56328 Score: 60
Period size: 12 Copynumber: 3.2 Consensus size: 12
56280 TCACTTCATC
56290 AAATTCAAATCA
1 AAATTCAAATCA
*
56302 AAATTCAAATTA
1 AAATTCAAATCA
*
56314 AAGTTCAAATCA
1 AAATTCAAATCA
56326 AAA
1 AAA
56329 GTGAATCAAA
Statistics
Matches: 23, Mismatches: 4, Indels: 0
0.85 0.15 0.00
Matches are distributed among these distances:
12 23 1.00
ACGTcount: A:0.59, C:0.13, G:0.03, T:0.26
Consensus pattern (12 bp):
AAATTCAAATCA
Found at i:56703 original size:12 final size:12
Alignment explanation
Indices: 56688--56732 Score: 58
Period size: 12 Copynumber: 3.8 Consensus size: 12
56678 AAAAACTAAA
56688 AAAAAAGAAATG
1 AAAAAAGAAATG
*
56700 AAAAATGAAATG
1 AAAAAAGAAATG
56712 AAAAAATG--ATG
1 AAAAAA-GAAATG
56723 AAAAAAGAAA
1 AAAAAAGAAA
56733 AATAAGAACA
Statistics
Matches: 28, Mismatches: 2, Indels: 6
0.78 0.06 0.17
Matches are distributed among these distances:
10 1 0.04
11 9 0.32
12 17 0.61
13 1 0.04
ACGTcount: A:0.73, C:0.00, G:0.16, T:0.11
Consensus pattern (12 bp):
AAAAAAGAAATG
Found at i:57917 original size:50 final size:50
Alignment explanation
Indices: 57643--57915 Score: 465
Period size: 50 Copynumber: 5.5 Consensus size: 50
57633 CCATCCGAAT
* * *
57643 ACATAGGCTTTTCCACAAGCCAAGCTCGTTTCCATACGGGTCAATTATCA
1 ACATGGGCTTTTCCACAAGCCAAACTCGTTTCCATACGAGTCAATTATCA
* *
57693 ACGTGGGCTTTTCCACAAGCCAAACTCGTTTCCATACGGGTCAATTATCA
1 ACATGGGCTTTTCCACAAGCCAAACTCGTTTCCATACGAGTCAATTATCA
*
57743 ACATGGGCTTTCCCACAAGCCAAACTCGTTTCCATACGAGTCAATTATCA
1 ACATGGGCTTTTCCACAAGCCAAACTCGTTTCCATACGAGTCAATTATCA
57793 ACATGGGCTTTTCCACAAGCCAAACTCGTTTCCATACGAGTCAATTATCA
1 ACATGGGCTTTTCCACAAGCCAAACTCGTTTCCATACGAGTCAATTATCA
* *
57843 ACATGGGCTTTTCCACAAGCCAAGCTCGTTTCCATATGAGTCAATTATCA
1 ACATGGGCTTTTCCACAAGCCAAACTCGTTTCCATACGAGTCAATTATCA
*
57893 ACATAGGCTTTTCCACAAGCCAA
1 ACATGGGCTTTTCCACAAGCCAA
57916 GCC
Statistics
Matches: 213, Mismatches: 10, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
50 213 1.00
ACGTcount: A:0.29, C:0.28, G:0.15, T:0.27
Consensus pattern (50 bp):
ACATGGGCTTTTCCACAAGCCAAACTCGTTTCCATACGAGTCAATTATCA
Done.